Re: PSSD Genome Project [Megathread]
Posted: Wed Apr 17, 2019 6:50 pm
@Mesolimbo
When using the charts remember that:
C = RED
G = GREEN
A = BLUE
T = BLACK
Heterozygotes will be combinations of the above colors.
5HTTPLR allele
- rs25531 (irrelevant on 23+Me apparently - all are called C/C)
- rs25532:
-- 4 SNPs for rs25532 analyzed for frequency --
CC: 0.0
CG: 0.0
GG: 50.0
AA: 0.0
AT: 0.0
TT: 0.0
CT: 0.0
AG: 50.0
AC: 0.0
GT: 0.0
CHART (Click to open):
https://chart.apis.google.com/chart?cht ... ,1,0|1,1,0
- rs2129785:
-- 28 SNPs for rs2129785 analyzed for frequency --
CC: 0.0
CG: 0.0
GG: 0.0
AA: 0.0
AT: 0.0
TT: 85.71428571428571
CT: 14.285714285714285
AG: 0.0
AC: 0.0
GT: 0.0
https://chart.apis.google.com/chart?cht ... ,1,0|1,1,0
- rs11867581:
-- 29 SNPs for rs11867581 analyzed for frequency --
CC: 0.0
CG: 0.0
GG: 13.793103448275861
AA: 37.93103448275862
AT: 0.0
TT: 0.0
CT: 0.0
AG: 48.275862068965516
AC: 0.0
GT: 0.0
https://chart.apis.google.com/chart?cht ... ,1,0|1,1,0
--------------------------------------------------------------------------------------------------------
COMT-Met
- rs4680:
-- 29 SNPs for rs4680 analyzed for frequency --
CC: 0.0
CG: 0.0
GG: 27.586206896551722
AA: 20.689655172413794
AT: 0.0
TT: 0.0
CT: 0.0
AG: 51.724137931034484
AC: 0.0
GT: 0.0
https://chart.apis.google.com/chart?cht ... ,1,0|1,1,0
- rs4633:
-- 28 SNPs for rs4633 analyzed for frequency --
CC: 25.0
CG: 0.0
GG: 0.0
AA: 0.0
AT: 0.0
TT: 21.428571428571427
CT: 53.57142857142857
AG: 0.0
AC: 0.0
GT: 0.0
https://chart.apis.google.com/chart?cht ... ,1,0|1,1,0
- rs165599:
-- 29 SNPs for rs165599 analyzed for frequency --
CC: 0.0
CG: 0.0
GG: 6.896551724137931
AA: 31.03448275862069
AT: 0.0
TT: 0.0
CT: 0.0
AG: 62.06896551724138
AC: 0.0
GT: 0.0
https://chart.apis.google.com/chart?cht ... ,1,0|1,1,0
--------------------------------------------------------------------------------------------------------
FKBP5:
- rs1360780
-- 28 SNPs for rs1360780 analyzed for frequency --
CC: 57.14285714285714
CG: 0.0
GG: 0.0
AA: 0.0
AT: 0.0
TT: 14.285714285714285
CT: 28.57142857142857
AG: 0.0
AC: 0.0
GT: 0.0
https://chart.apis.google.com/chart?cht ... ,1,0|1,1,0
When using the charts remember that:
C = RED
G = GREEN
A = BLUE
T = BLACK
Heterozygotes will be combinations of the above colors.
5HTTPLR allele
- rs25531 (irrelevant on 23+Me apparently - all are called C/C)
- rs25532:
-- 4 SNPs for rs25532 analyzed for frequency --
CC: 0.0
CG: 0.0
GG: 50.0
AA: 0.0
AT: 0.0
TT: 0.0
CT: 0.0
AG: 50.0
AC: 0.0
GT: 0.0
CHART (Click to open):
https://chart.apis.google.com/chart?cht ... ,1,0|1,1,0
- rs2129785:
-- 28 SNPs for rs2129785 analyzed for frequency --
CC: 0.0
CG: 0.0
GG: 0.0
AA: 0.0
AT: 0.0
TT: 85.71428571428571
CT: 14.285714285714285
AG: 0.0
AC: 0.0
GT: 0.0
https://chart.apis.google.com/chart?cht ... ,1,0|1,1,0
- rs11867581:
-- 29 SNPs for rs11867581 analyzed for frequency --
CC: 0.0
CG: 0.0
GG: 13.793103448275861
AA: 37.93103448275862
AT: 0.0
TT: 0.0
CT: 0.0
AG: 48.275862068965516
AC: 0.0
GT: 0.0
https://chart.apis.google.com/chart?cht ... ,1,0|1,1,0
--------------------------------------------------------------------------------------------------------
COMT-Met
- rs4680:
-- 29 SNPs for rs4680 analyzed for frequency --
CC: 0.0
CG: 0.0
GG: 27.586206896551722
AA: 20.689655172413794
AT: 0.0
TT: 0.0
CT: 0.0
AG: 51.724137931034484
AC: 0.0
GT: 0.0
https://chart.apis.google.com/chart?cht ... ,1,0|1,1,0
- rs4633:
-- 28 SNPs for rs4633 analyzed for frequency --
CC: 25.0
CG: 0.0
GG: 0.0
AA: 0.0
AT: 0.0
TT: 21.428571428571427
CT: 53.57142857142857
AG: 0.0
AC: 0.0
GT: 0.0
https://chart.apis.google.com/chart?cht ... ,1,0|1,1,0
- rs165599:
-- 29 SNPs for rs165599 analyzed for frequency --
CC: 0.0
CG: 0.0
GG: 6.896551724137931
AA: 31.03448275862069
AT: 0.0
TT: 0.0
CT: 0.0
AG: 62.06896551724138
AC: 0.0
GT: 0.0
https://chart.apis.google.com/chart?cht ... ,1,0|1,1,0
--------------------------------------------------------------------------------------------------------
FKBP5:
- rs1360780
-- 28 SNPs for rs1360780 analyzed for frequency --
CC: 57.14285714285714
CG: 0.0
GG: 0.0
AA: 0.0
AT: 0.0
TT: 14.285714285714285
CT: 28.57142857142857
AG: 0.0
AC: 0.0
GT: 0.0
https://chart.apis.google.com/chart?cht ... ,1,0|1,1,0